FQHC Cost Report Preparation Checklist
An annual FQHC cost report preparation checklist for gathering visit, revenue, and expense data before CMS Form 222-92 is prepared. Use it to assign owners, verify source records, and catch missing support early.
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Overview
This checklist organizes the annual work needed to prepare an FQHC Medicare cost report, including collecting visit data, revenue detail, payroll support, expense allocations, and reconciliation evidence for CMS Form 222-92. It is designed for the prep phase, when multiple departments need to provide source records and someone must verify that the numbers tie back to the general ledger, billing system, and clinic logs.
Use it when you want a repeatable process for gathering the inputs that feed the cost report, especially if the work is spread across finance, billing, operations, and clinic leadership. It is also useful when you need to separate blocking issues, such as missing encounter data or unreconciled revenue, from non-blocking follow-ups that can be documented and resolved later.
Do not use this template as a substitute for the final cost report or for unrelated compliance programs. It is not a general healthcare audit checklist, and it should not be stretched to cover every finance task in the organization. The value is in keeping the scope tight: each checklist item should point to one verifiable record, one owner, and one clear outcome so the team can complete prep without losing time to vague requests or duplicated requests for the same support.
Standards & compliance context
- This template supports preparation for CMS Form 222-92 by organizing the source data and verification steps needed for the Medicare cost report.
- Use it to maintain a clear audit trail of who verified each source record, which helps support internal review and external audit readiness.
- Do not treat the checklist as legal or reimbursement advice; confirm final reporting requirements with your reimbursement or compliance lead.
- If your organization has state-specific reporting or grant requirements, add separate checklist items rather than folding them into the Medicare cost report prep flow.
General regulatory context for orientation only — verify current requirements with counsel or the relevant agency before relying on this template for compliance.
How to use this template
- Create the checklist at the start of the cost report cycle and set the recurrence to annual with the specific due month that matches your filing calendar.
- Assign each checklist item to the DRI who can verify the source record, such as billing, payroll, finance, or clinic operations.
- Attach the exact reports, exports, or folders needed for each item so the reviewer can confirm the evidence without searching across systems.
- Mark items as blocking when a missing record prevents report prep, and keep non-blocking follow-ups separate so the team can continue working.
- Review the completed checklist against the general ledger, visit counts, and revenue reconciliations before the final report is assembled.
- Close the checklist with a short lessons-learned review and update the next cycle with any new source systems, allocation rules, or recurring gaps.
Best practices
- Keep each checklist item to one verifiable action, such as verifying a report, reconciling a ledger, or confirming a source file.
- Use normal priority for most items and reserve critical only for gaps that can affect filing accuracy or compliance.
- Separate visit counts, revenue support, and expense allocations into distinct checklist items so a single failure does not hide other completed work.
- Name the source system or document in the checklist item so the DRI knows exactly what to pull and verify.
- Flag missing support as blocking only when the cost report cannot move forward without it; otherwise track it as non-blocking follow-up.
- Review the checklist with finance and operations together before year-end so clinic-level discrepancies are found while records are still accessible.
- Keep a record of the verification step for each item, especially when the answer is yes or no but the underlying support lives in another system.
What this template typically catches
Issues teams running this template most often surface in practice:
Common use cases
Frequently asked questions
What does this FQHC cost report preparation checklist cover?
This checklist covers the data-gathering and verification work needed before preparing the FQHC Medicare cost report, including visit counts, revenue detail, expense support, and reconciliation items. It is meant to organize the source documents and review steps that feed CMS Form 222-92, not to replace the final report itself. Use it to make sure each required data set has an owner, a source, and a verification step.
How often should this checklist run?
It is typically used annually, aligned to the cost report cycle, but many FQHCs run parts of it quarterly or monthly to avoid year-end scrambling. A recurring cadence helps surface missing visit logs, payroll allocations, or revenue reconciliations while records are still easy to correct. If your finance team closes books monthly, you can adapt the checklist to a monthly pre-close review and keep the annual version as the final prep pass.
Who should own the checklist tasks?
The DRI is usually a finance lead, reimbursement manager, or cost report preparer, with supporting tasks assigned to billing, revenue cycle, operations, and clinic managers. The best setup is to assign each checklist item to the person who can verify the source record directly. Avoid assigning everything to one person if they do not control the underlying data.
Is this checklist only for Medicare cost report filing?
It is designed for Medicare cost report preparation, but the same structure can help with internal reimbursement reviews and audit readiness. The checklist focuses on the records and reconciliations that support the report, so it is useful before filing and during pre-submission review. If you need a broader compliance audit checklist, this template is narrower and more report-specific.
What are the most common mistakes this checklist helps prevent?
Common failures include missing encounter support, mismatched visit counts between systems, incomplete payroll or fringe allocations, and revenue not tied back to the general ledger. Another frequent issue is treating every discrepancy as blocking when some items can be documented and resolved later. This checklist helps separate blocking items from non-blocking follow-ups so the report can keep moving.
How should I customize it for our FQHC?
Customize the checklist to match your service lines, cost centers, payer mix, and any contracted or shared services that affect allocation. Add checklist items for the systems you actually use, such as EHR, billing, payroll, and general ledger exports, and remove items that do not apply. Keep each item independently verifiable so the answer is clearly yes, no, or N/A.
Can this checklist connect to our accounting or EHR tools?
Yes, it works well as a task template that links out to source systems, exported reports, and supporting documents. Many teams attach the checklist item to the relevant report, spreadsheet, or folder so the reviewer can verify the evidence without hunting across systems. If you use integrations, map each task to the exact export or record set needed for the cost report.
How is this better than doing cost report prep in email or spreadsheets?
An ad-hoc approach makes it easy to miss a source file, duplicate work, or lose track of who verified what. A checklist creates a repeatable sequence with clear ownership, priority, and completion criteria, which is especially useful when multiple departments contribute data. It also gives you a single place to track blocking issues before they become filing delays.
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